BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB004B10LP1|AL425230
(916 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1622 607 e-174
>3x_Contig1622
Length = 13445
Score = 607 bits (306), Expect = e-174
Identities = 314/316 (99%), Gaps = 1/316 (0%)
Strand = Plus / Plus
Query: 601 gcgagaaggatggccaactttattctttggttataaagcaaccttgagtcgggatctacc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcgagaaggatggccaactttattctttggttataaagcaaccttgagtcgggatctacc 60
Query: 661 gttttctgggttacaatttgcattttatgagaaatttagacaacttgcattcgcagtaga 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gttttctgggttacaatttgcattttatgagaaatttagacaacttgcattcgcagtaga 120
Query: 721 gaataaaacgtttgatgaagatttatctctgagtaacgaaataattaccggtgctgctgc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gaataaaacgtttgatgaagatttatctctgagtaacgaaataattaccggtgctgctgc 180
Query: 781 aggtggtcttgctggtatcataacaactccattagatgttgtaaagacaagaatccagac 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aggtggtcttgctggtatcataacaactccattagatgttgtaaagacaagaatccagac 240
Query: 841 acagctaccagatatccctgaaaatagttctcagaatttaaagcagcmaacggttgacaa 900
||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||
Sbjct: 241 acagctaccagatatccctgaaaatagttctcagaatttaaagcagcaaac-gttgacaa 299
Query: 901 attccattacgaaagg 916
||||||||||||||||
Sbjct: 300 attccattacgaaagg 315
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6196
Number of Sequences: 1807
Number of extensions: 6196
Number of successful extensions: 50
Number of sequences better than 1.0e-20: 1
length of query: 916
length of database: 10,358,551
effective HSP length: 16
effective length of query: 900
effective length of database: 10,329,639
effective search space: 9296675100
effective search space used: 9296675100
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)